CDS

Accession Number TCMCG007C45941
gbkey CDS
Protein Id XP_009106140.1
Location complement(join(26532174..26532510,26532617..26532724,26532803..26533117,26533267..26535101))
Gene LOC103831944
GeneID 103831944
Organism Brassica rapa

Protein

Length 864aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009107892.3
Definition pentatricopeptide repeat-containing protein At1g74850, chloroplastic [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description Small MutS-related domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000229        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009295        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009508        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0042646        [VIEW IN EMBL-EBI]
GO:0042793        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAACCTCGCAATCCCCAATCCCAACTCACACCACCTCTCCTTCCTCATCCAGAACTCCACCTTCATCACAAACCGCAGGCTCTTCGCCAACAACCCCAACCGCCTCACCTTCCTCTCCGGCGGGAAACGACCCTCCTCCGTCGCCAAAATCAACGCGAAGACGAAGGATCTCGTCCTCGGGAACCCCTCCGTATCCGTCGAGAAGGGGAAATACACCTACGACGTCGAGTCCCTAATCAACAAACTCAGCAGCCTCCCGCCGCGCGGCAGCATCGCTCGGTGCCTCGACATATTCAAAAACAAGCTCTCCCTCAACGACTTCGCGCTCGTCTTCAAGGAGTTCGCCGGCCGCGGCGACTGGCAGAGGTCCCTCCGCCTCTTCAAGTACATGCAGCGGCAGATCTGGTGCAAGCCTAACGAGCACATCTACACCATCATGATCTCGCTGCTGGGAAGAGAAGGCTTGCTCGACAAGTGCCTCGAGGTGTTCGACGAAATGCCGAGCCAAGGCGTGGCGAGGAGCGTGTTCTCTTACACGGCGTTGATTAACGCTTACGGTAGAAACGGACGTTACGAGACGTCTCTCGAGCTTCTCGAGAGGATGAAGAGCGAGAAGATATCGCCTAGTATATTGACTTATAACACTGTGATAAATGCTTGTGCTAGAGGGGGGTTAGATTGGGAAGGTTTGTTAGGTTTGTTTGCGGAGATGAGACATGAAGGGATACAGCCTGATATCGTGACTTACAACACGCTGCTTAGCGCTTGTGCTATTAGAGGATTGGGGGATGAGTCTGAGATGGTGTTTAGGACTATGAACGATGGTGGGATTGTTCCGGATTTAACTACTTACAGTCATCTCGTTGAGACGTTTGGGAAGCTGGGGAGGTTAGAGAAAGTGTGTGATTTATTAAATGAGATGGCTTCAGGGGGGAGTTTGCCGGATATCACTTCTTACAATGTGTTGTTAGAGGCCTATGCTAAGTCCGGGTCTATTAAGGAGGCGATGGGGGTGTTCCATCAGATGCAGGCGGCAGGGTGTACGCCGAACGCGAATACTTACAGTGTTTTGCTGAATTTGTTTGGACAGAGTGGGAGGTATGATGATGTTCGGCAGCTTTTTCTCGAGATGAAGTCTAGCAATACGGATCCTGATGCTGCTACGTACAACATTTTGATTGATGTTTTTGGGGAAGGTGGGTATTTCAAGGAGGTGGTGACTTTGTTCCATGACATGGTGGAGGAGAATATTGAACCTGATATGGAGACATACGAGGGTATAATATTTGCTTGTGGGAAGGGAGGATTACACGAAGATGCGAGGAAGATTTTGCAGTATATGACGGCTAAGGATGTGGTGCCAAGTTCCAAGGCGTACACTGGGGTTATTGAAGCGTTTGGGCAGGCTGCTTTGTATGAAGAAGCACTCGTTGCTTTTAACACTATGCATGAAGTGGGAAGCAATCCGAGTATCGAGACATTCCACTCGCTGTTGTATTCTTTTGCAAGGGGAGGACTGTTCAAGGAGTCGGAGGTGATTTTGTCTAGGTTGGTGGATTCTGGTATTCCCAGGAACAGAGATACTTTCAATGCGACAATAGAAGCCTACAAGCAAGGAGGCAAATTTGAGGAGGCTGTGAAGACATATGTGGATATGGAGAAGTCAAGATGTGATCCTGATGAGAGGACGCTTGAGGCTGTTTTAAGTGTGTATTCTTGTGCACGACTTGTTGATGAGTGCAGGGAGCAGTTTGAGGAGATGAAAGCTTCTGATATACTACCCAGTATCATGTGCTACTGTATGATGCTGTCTGTTTATGGAAAAACCGAGAGGTGGGACGATGCCAATGAGTTACTGGAGGAGATGCTTTCAAACAGAGTATCAAATATTCATCAAGTTATCGGGCAAATGATCAAGGGAGATTATGATGATGACTCAAATTGGCAGATAGTGGAATATGTCTTAGACAAACTCAATTCAGAAGGATGTGGTTTGGGAATAAGGTTTTACAATGCTCTTCTGGATGCTTTGTGGTGGCTGGGCCAGAAAGAGCGAGCTGCAAGGGTACTCAATGAGGCAACAAAACGTGGAATTTTCCCTGAGTTATTCCGGAGAAACAAACTTGTGTGGTCTGTTGATGTGCATAGAATGTCAGAGGGTGGCATGTACACGGCGCTATCTGTTTGGCTAAATGATCTAAGTGATATGCTTGTAAAGGGACAGGATATTCCTCAACTAGCTGTTGTTGTTTCAGTACGGGGACAGTTGGAGAAAAGCTCTGCTGCAAGAGAATCTCCCATCACGAAAGCTGCTTTCTCCTTCTTGCAGGATCATGTCTCGTCGTCGTTTTCCTTCACGGGATGGAACGGAGGTCGCATTATGTGCCAGCGATCTCAGCTCAAGCAGTTACTTTCTACTCAAGAACCAACTTCAGAAGAGTCCCAAAAAAGTAGCCTAGTCGCTTTAACAAACTCGCCAATCTTTTCTGCTGGAACAAGAACTTCAACAAGCAGTGACACGAACAACAGCAGCGGTAACCCTTCCCAAAGAAGAACTAGGATGAAAAAAGAACTAGCGGGAAGCCCAGCTTAA
Protein:  
MNLAIPNPNSHHLSFLIQNSTFITNRRLFANNPNRLTFLSGGKRPSSVAKINAKTKDLVLGNPSVSVEKGKYTYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVARSVFSYTALINAYGRNGRYETSLELLERMKSEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDESEMVFRTMNDGGIVPDLTTYSHLVETFGKLGRLEKVCDLLNEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIDVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAKDVVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLFKESEVILSRLVDSGIPRNRDTFNATIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSCARLVDECREQFEEMKASDILPSIMCYCMMLSVYGKTERWDDANELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGIFPELFRRNKLVWSVDVHRMSEGGMYTALSVWLNDLSDMLVKGQDIPQLAVVVSVRGQLEKSSAARESPITKAAFSFLQDHVSSSFSFTGWNGGRIMCQRSQLKQLLSTQEPTSEESQKSSLVALTNSPIFSAGTRTSTSSDTNNSSGNPSQRRTRMKKELAGSPA